Bathyal megabenthic assemblages in the SE Iberian Peninsula (Western Mediterranean Sea)

The Iberian SE is an interesting transition and connectivity zone between the Alboran Sea and the Algerian-Balearic basin. It hosts important deep water fisheries targeting mostly red shrimp (Aristeus antennatus). The area comprises a complex system of tectonic canyons (Mazarron Escarpment), seamounts, knolls and hills (Palos, Planazo, Plis-Plas), and pockmark fields (Acosta et al., 2013). Few studies have been conducted on the bathyal megabenthos, unlike in the neighbouring Chella Bank (De la Torriente et al. 2018) and Balearic Islands (Massuti et al. 2022). The LIFE IP Intemares project is filling this gap

Bathyal megabenthic assemblages in the south-eastern Iberian Peninsula (Western Mediterranean)

The SE Iberian sector represents an interesting transition and connectivity zone between the Alboran Sea and the Algerian Balearic basin, and the area comprises a system of tectonic canyons (Mazarron Escarpment), seamounts and pockmarks fields. Despite this, relatively few studies have been conducted on the bathyal zone. During the LIFE IP Intemares A2.2-Mu0820 survey, the continental slope was observed by ROV Liropus-2000, between 183 and 1735m depth following bathymetric mapping using a multibeam echosounder. A combination of multivariate analysis of still imagery and video groundtruthing have been able to discriminate some megabenthic assemblages. On hard bottoms of the upper bathyal horizon: i) Neopycnodonte cochear-Mergelia truncata facies, 193-244m depth; ii) Ellisella flagellum facies, 2441-320m; iii) Antipathes dichotoma facies, 259-270m. Middle horizon: i) Demospongiae facies (Pachastrella, Phakellia, Aaptos…), 241-494m; ii) gorgonian assemblage (Callogorgia, Paramuricea, Placogorgia), 294-624m; iii) Leptometra phalangium facies 293-611m; iv) cold-water corals (Desmophyllum, Madrepora), 516-607m; Antipatharia facies (Antipathella, Leiopathes, Parantipathes), 519-624m. Lower bathyal horizon:; Dicopia antirrhinum facies, 645-1167m. On soft bottoms (mud, sandy-mud) of the upper bathyal horizon: i) Ceriantharia facies, 213-219m depth. Middle horizon: i) Pennatulacea facies (Funiculina, Kophobelemnon, Pteroeides…), 219-541m; ii) Thenea muricata facies, 418-814m; iii) Isidella elongata facies, 462-681m. Lower horizon: i) Pelosina fields, 235-1321m. The results reveals that the bathyal zone of the SE Iberian Peninsula is topographically complex and harbours diverse benthic assemblages, some of which fall within the category of Vulnerable Marine Ecosystems; and some species are listed in annex II of the RAC/SPA list of endangered or threatened species

Vulnerable Marine Ecosystems found in a bathyal zone off the SE Iberian Peninsula (Western Mediterranean)

The Spanish Intemares LIFE IP project contemplates the creation of Special Areas of Conservation within the Natura 2000 Network. During its August 2019 cruise, a series of towed sledge transects were conducted on two seamounts (“Planazo” and “Plis Plas”) and a muddy field of pockmarks, both located in areas off the SE Iberian Peninsula (Western Mediterranean), between 220 and 694m depth. The prospected area has a significant pressure from bottom trawl (directed towards Aristeus antennatus, Nephrops norvegicus, Plesionika spp.) and, to a smaller extent, of bottom longline fisheries (focused on Merluccius merluccius and Pagellus bogaraveo). Some of the observed bathyal habitats fall into the category of Vulnerable Marine Ecosystems (VME), according to FAO (2009, 2016), since they present at least one of the following characteristics: i) uniqueness or rarity; ii) functional significance of habitat; iii) fragility; iv) life history traits of component species that make recovery difficult; and/or v) structural complexity. Among them, “gorgonian gardens” (of Paramuricea hirsuta, Callogorgia verticillata, Bebryce mollis, Swiftia pallida, and Ellisella flagellum) and the yellow tree coral (Dendrophyllia cornigera) highlight rocky bottoms; while on muddy substrates, sea-pen fields (Funiculina quadrangularis and Kophobelemnon stelliferum) and “bamboo coral gardens” (Isidella elongata) do so. These habitats, along with fields of the crinoid Leptometra phalangium, are also considered Essential Habitats for target species of fishing interest. The location, mapping and characterization of these habitats are necessary to establish “no-take” zones within the future management plan for the area studied

SARS-CoV-2 viral load in nasopharyngeal swabs is not an independent predictor of unfavorable outcome

The aim was to assess the ability of nasopharyngeal SARS-CoV-2 viral load at first patient’s hospital evaluation to predict unfavorable outcomes. We conducted a prospective cohort study including 321 adult patients with confirmed COVID-19 through RT-PCR in nasopharyngeal swabs. Quantitative Synthetic SARS-CoV-2 RNA cycle threshold values were used to calculate the viral load in log10 copies/mL. Disease severity at the end of follow up was categorized into mild, moderate, and severe. Primary endpoint was a composite of intensive care unit (ICU) admission and/or death (n = 85, 26.4%). Univariable and multivariable logistic regression analyses were performed. Nasopharyngeal SARS-CoV-2 viral load over the second quartile (≥ 7.35 log10 copies/mL, p = 0.003) and second tertile (≥ 8.27 log10 copies/mL, p = 0.01) were associated to unfavorable outcome in the unadjusted logistic regression analysis. However, in the final multivariable analysis, viral load was not independently associated with an unfavorable outcome. Five predictors were independently associated with increased odds of ICU admission and/or death: age ≥ 70 years, SpO2, neutrophils > 7.5 × 103/µL, lactate dehydrogenase ≥ 300 U/L, and C-reactive protein ≥ 100 mg/L. In summary, nasopharyngeal SARS-CoV-2 viral load on admission is generally high in patients with COVID-19, regardless of illness severity, but it cannot be used as an independent predictor of unfavorable clinical outcome

Dendritic cell deficiencies persist seven months after SARS-CoV-2 infection

Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV)-2 infection induces an exacerbated inflammation driven by innate immunity components. Dendritic cells (DCs) play a key role in the defense against viral infections, for instance plasmacytoid DCs (pDCs), have the capacity to produce vast amounts of interferon-alpha (IFN-α). In COVID-19 there is a deficit in DC numbers and IFN-α production, which has been associated with disease severity. In this work, we described that in addition to the DC deficiency, several DC activation and homing markers were altered in acute COVID-19 patients, which were associated with multiple inflammatory markers. Remarkably, previously hospitalized and nonhospitalized patients remained with decreased numbers of CD1c+ myeloid DCs and pDCs seven months after SARS-CoV-2 infection. Moreover, the expression of DC markers such as CD86 and CD4 were only restored in previously nonhospitalized patients, while no restoration of integrin β7 and indoleamine 2,3-dyoxigenase (IDO) levels were observed. These findings contribute to a better understanding of the immunological sequelae of COVID-19

Acute aneurysmal rupture in a severe SAH patient seen on head CT angiography scan

Peer reviewe

Vulnerable Marine Ecosystems found in a Bathyal Zone off the SE Iberian Peninsula (Western Mediterranean)

Description of VMEs (gorgonian and bamboo coral gardens) found in two seamounts during one of the INTEMARES surveys using a towed camera

Understanding the neuroprotective effect of tranexamic acid: an exploratory analysis of the CRASH-3 randomised trial

Background: The CRASH-3 trial hypothesised that timely tranexamic acid (TXA) treatment might reduce deaths from intracranial bleeding after traumatic brain injury (TBI). To explore the mechanism of action of TXA in TBI, we examined the timing of its effect on death. Methods: The CRASH-3 trial randomised 9202 patients within 3 h of injury with a GCS score ≤ 12 or intracranial bleeding on CT scan and no significant extracranial bleeding to receive TXA or placebo. We conducted an exploratory analysis of the effects of TXA on all-cause mortality within 24 h of injury and within 28 days, excluding patients with a GCS score of 3 or bilateral unreactive pupils, stratified by severity and country income. We pool data from the CRASH-2 and CRASH-3 trials in a one-step fixed effects individual patient data meta-analysis. Results: There were 7637 patients for analysis after excluding patients with a GCS score of 3 or bilateral unreactive pupils. Of 1112 deaths, 23.3% were within 24 h of injury (early deaths). The risk of early death was reduced with TXA (112 (2.9%) TXA group vs 147 (3.9%) placebo group; risk ratio [RR] RR 0.74, 95% CI 0.58–0.94). There was no evidence of heterogeneity by severity (p = 0.64) or country income (p = 0.68). The risk of death beyond 24 h of injury was similar in the TXA and placebo groups (432 (11.5%) TXA group vs 421 (11.7%) placebo group; RR 0.98, 95% CI 0.69–1.12). The risk of death at 28 days was 14.0% in the TXA group versus 15.1% in the placebo group (544 vs 568 events; RR 0.93, 95% CI 0.83–1.03). When the CRASH-2 and CRASH-3 trial data were pooled, TXA reduced early death (RR 0.78, 95% CI 0.70–0.87) and death within 28 days (RR 0.88, 95% CI 0.82–0.94). Conclusions: Tranexamic acid reduces early deaths in non-moribund TBI patients regardless of TBI severity or country income. The effect of tranexamic acid in patients with isolated TBI is similar to that in polytrauma. Treatment is safe and even severely injured patients appear to benefit when treated soon after injury. Trial registration: ISRCTN15088122, registered on 19 July 2011; NCT01402882, registered on 26 July 2011

Conservation agriculture and climate change

This chapter review aims at developing a clear understanding of the impacts and benefits of conservation agriculture (CA) with respect to climate change, and examining if there are any misleading findings at present in the scientific literature. Most of the world’s agricultural soils have been depleted of organic matter and soil health over the years under tillage-based agriculture (TA), compared with their state under natural vegetation. This degradation process can be reversed and this chapter identifies the conditions that can lead to increase in soil organic matter content and improvement in soil health under CA practices which involve minimum soil disturbance, maintenance of soil cover, and crop diversity. The chapter also discusses the need to refer to specific carbon pools when addressing carbon sequestration, as each carbon category has a different turnover rate. With respect to greenhouse gas emissions, sustainable agricultural systems based on CA principles are described which result in lower emissions from farm operations as well as from machinery manufacturing processes, and that also help to reduce fertilizer use. This chapter describes that terrestrial carbon sequestration efficiently be achieved by changing the management of agricultural lands from high soil disturbance, as TA practices to low disturbance, as CA practices, and by adopting effective nitrogen management practices to provide a positive nitrogen balance for carbon sequestration. However, full advantages of CA in terms of carbon sequestration can usually be observed only in the medium to longer term when CA practices and associated carbon sequestration processes in the soil are well established